Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sox18P43680 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sox18P43680 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox18P43680 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sox18P43680 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox18P43680 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Sox18P43680 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.03□□□□□ -0.48
Sox18P43680 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Sox18P43680 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox18P43680 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sox18P43680 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox18P43680 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Sox18P43680 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox18P43680 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox18P43680 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox18P43680 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox18P43680 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Sox18P43680 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox18P43680 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox18P43680 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox18P43680 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.02□□□□□ -0.48
Sox18P43680 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox18P43680 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox18P43680 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox18P43680 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.02□□□□□ -0.48
Sox18P43680 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.02□□□□□ -0.49
Sox18P43680 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.02□□□□□ -0.49
Sox18P43680 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Gm28324-201ENSMUST00000187913 264 ntBASIC12.02□□□□□ -0.49
Sox18P43680 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.02□□□□□ -0.49
Sox18P43680 Gm45701-201ENSMUST00000212049 235 ntBASIC12.02□□□□□ -0.49
Sox18P43680 AC132104.1-201ENSMUST00000213615 260 ntBASIC12.02□□□□□ -0.49
Sox18P43680 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.02□□□□□ -0.49
Sox18P43680 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.02□□□□□ -0.49
Sox18P43680 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Gm25517-201ENSMUST00000083865 134 ntBASIC12.02□□□□□ -0.49
Sox18P43680 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sox18P43680 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.02□□□□□ -0.49
Sox18P43680 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.02□□□□□ -0.49
Sox18P43680 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Sox18P43680 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.02□□□□□ -0.49
Sox18P43680 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox18P43680 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Sox18P43680 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox18P43680 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Sox18P43680 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox18P43680 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.01□□□□□ -0.49
Sox18P43680 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sox18P43680 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox18P43680 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox18P43680 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sox18P43680 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.01□□□□□ -0.49
Sox18P43680 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sox18P43680 Mir6546-201ENSMUST00000184460 62 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms