Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Gm15703-201ENSMUST00000120250 880 ntBASIC12.67□□□□□ -0.38
Mmp13P33435 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.67□□□□□ -0.38
Mmp13P33435 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.67□□□□□ -0.38
Mmp13P33435 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.67□□□□□ -0.38
Mmp13P33435 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.67□□□□□ -0.38
Mmp13P33435 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.67□□□□□ -0.38
Mmp13P33435 Gm4768-201ENSMUST00000206199 686 ntBASIC12.67□□□□□ -0.38
Mmp13P33435 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Gm45880-201ENSMUST00000213041 853 ntBASIC12.67□□□□□ -0.38
Mmp13P33435 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.67□□□□□ -0.38
Mmp13P33435 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.67□□□□□ -0.38
Mmp13P33435 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.67□□□□□ -0.38
Mmp13P33435 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.67□□□□□ -0.38
Mmp13P33435 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Mmp13P33435 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.67□□□□□ -0.38
Mmp13P33435 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.67□□□□□ -0.38
Mmp13P33435 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Mmp13P33435 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.67□□□□□ -0.38
Mmp13P33435 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.66□□□□□ -0.38
Mmp13P33435 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Mmp13P33435 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Mmp13P33435 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.66□□□□□ -0.38
Mmp13P33435 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Snord83b-201ENSMUST00000104546 94 ntBASIC12.66□□□□□ -0.38
Mmp13P33435 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Gm5187-201ENSMUST00000117317 991 ntBASIC12.66□□□□□ -0.38
Mmp13P33435 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Mmp13P33435 Gm16296-201ENSMUST00000159905 325 ntBASIC12.66□□□□□ -0.38
Mmp13P33435 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.66□□□□□ -0.38
Mmp13P33435 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.66□□□□□ -0.38
Mmp13P33435 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.66□□□□□ -0.38
Mmp13P33435 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.66□□□□□ -0.38
Mmp13P33435 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Mmp13P33435 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Mmp13P33435 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.66□□□□□ -0.38
Mmp13P33435 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Mmp13P33435 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.66□□□□□ -0.38
Mmp13P33435 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp13P33435 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.65□□□□□ -0.38
Mmp13P33435 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.65□□□□□ -0.38
Mmp13P33435 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Mmp13P33435 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.65□□□□□ -0.38
Mmp13P33435 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Mmp13P33435 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Mmp13P33435 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms