Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.2□□□□□ -0.46
Hoxa4P06798 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxa4P06798 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxa4P06798 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hoxa4P06798 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.19□□□□□ -0.46
Hoxa4P06798 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.19□□□□□ -0.46
Hoxa4P06798 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxa4P06798 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Hoxa4P06798 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hoxa4P06798 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.19□□□□□ -0.46
Hoxa4P06798 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.19□□□□□ -0.46
Hoxa4P06798 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Gm44651-201ENSMUST00000207343 372 ntBASIC12.19□□□□□ -0.46
Hoxa4P06798 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.19□□□□□ -0.46
Hoxa4P06798 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxa4P06798 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa4P06798 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Hoxa4P06798 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxa4P06798 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Hoxa4P06798 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hoxa4P06798 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.18□□□□□ -0.46
Hoxa4P06798 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxa4P06798 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.18□□□□□ -0.46
Hoxa4P06798 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxa4P06798 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxa4P06798 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxa4P06798 Gm4857-201ENSMUST00000192718 785 ntBASIC12.18□□□□□ -0.46
Hoxa4P06798 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.18□□□□□ -0.46
Hoxa4P06798 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.18□□□□□ -0.46
Hoxa4P06798 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.18□□□□□ -0.46
Hoxa4P06798 Gzmn-202ENSMUST00000225535 989 ntBASIC12.18□□□□□ -0.46
Hoxa4P06798 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Hoxa4P06798 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.18□□□□□ -0.46
Hoxa4P06798 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hoxa4P06798 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Hoxa4P06798 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.18□□□□□ -0.46
Hoxa4P06798 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa4P06798 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms