Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Gm23363-201ENSMUST00000175024 79 ntBASIC12.17□□□□□ -0.46
ClppO88696 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.17□□□□□ -0.46
ClppO88696 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.17□□□□□ -0.46
ClppO88696 Gm18165-201ENSMUST00000217426 928 ntBASIC12.17□□□□□ -0.46
ClppO88696 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.17□□□□□ -0.46
ClppO88696 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
ClppO88696 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
ClppO88696 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.17□□□□□ -0.46
ClppO88696 Btrc-209ENSMUST00000224478 2194 ntBASIC12.17□□□□□ -0.46
ClppO88696 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.17□□□□□ -0.46
ClppO88696 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.17□□□□□ -0.46
ClppO88696 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.16□□□□□ -0.46
ClppO88696 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.16□□□□□ -0.46
ClppO88696 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
ClppO88696 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.16□□□□□ -0.46
ClppO88696 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.16□□□□□ -0.46
ClppO88696 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Gm14704-201ENSMUST00000120300 874 ntBASIC12.16□□□□□ -0.46
ClppO88696 Gm12291-201ENSMUST00000121627 311 ntBASIC12.16□□□□□ -0.46
ClppO88696 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.16□□□□□ -0.46
ClppO88696 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ClppO88696 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.16□□□□□ -0.46
ClppO88696 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.16□□□□□ -0.46
ClppO88696 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.16□□□□□ -0.46
ClppO88696 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClppO88696 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
ClppO88696 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.15□□□□□ -0.46
ClppO88696 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
ClppO88696 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.15□□□□□ -0.46
ClppO88696 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.15□□□□□ -0.46
ClppO88696 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.15□□□□□ -0.46
ClppO88696 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.15□□□□□ -0.46
ClppO88696 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.15□□□□□ -0.46
ClppO88696 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
ClppO88696 Gm31256-201ENSMUST00000194705 506 ntBASIC12.15□□□□□ -0.46
ClppO88696 Gm30285-201ENSMUST00000214614 422 ntBASIC12.15□□□□□ -0.46
ClppO88696 Gm6082-201ENSMUST00000215204 454 ntBASIC12.15□□□□□ -0.46
ClppO88696 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.15□□□□□ -0.46
ClppO88696 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.15□□□□□ -0.46
ClppO88696 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms