Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chrna4O70174 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Chrna4O70174 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Chrna4O70174 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Chrna4O70174 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chrna4O70174 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Chrna4O70174 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chrna4O70174 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chrna4O70174 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chrna4O70174 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.48□□□□□ -0.41
Chrna4O70174 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chrna4O70174 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chrna4O70174 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.48□□□□□ -0.41
Chrna4O70174 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.48□□□□□ -0.41
Chrna4O70174 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chrna4O70174 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chrna4O70174 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Chrna4O70174 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.47□□□□□ -0.41
Chrna4O70174 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Chrna4O70174 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.47□□□□□ -0.41
Chrna4O70174 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.47□□□□□ -0.41
Chrna4O70174 Gm43630-201ENSMUST00000201550 776 ntBASIC12.47□□□□□ -0.41
Chrna4O70174 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.47□□□□□ -0.41
Chrna4O70174 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.47□□□□□ -0.41
Chrna4O70174 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Chrna4O70174 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Chrna4O70174 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Chrna4O70174 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.47□□□□□ -0.41
Chrna4O70174 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chrna4O70174 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.47□□□□□ -0.41
Chrna4O70174 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Chrna4O70174 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Chrna4O70174 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Chrna4O70174 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Chrna4O70174 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.46□□□□□ -0.41
Chrna4O70174 Gm24845-201ENSMUST00000158034 109 ntBASIC12.46□□□□□ -0.41
Chrna4O70174 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.46□□□□□ -0.41
Chrna4O70174 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Mir8109-201ENSMUST00000184375 117 ntBASIC12.46□□□□□ -0.41
Chrna4O70174 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Gm6334-201ENSMUST00000207083 228 ntBASIC12.46□□□□□ -0.41
Chrna4O70174 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.46□□□□□ -0.41
Chrna4O70174 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.46□□□□□ -0.41
Chrna4O70174 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.46□□□□□ -0.41
Chrna4O70174 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.46□□□□□ -0.41
Chrna4O70174 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Chrna4O70174 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.46□□□□□ -0.41
Chrna4O70174 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chrna4O70174 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.46□□□□□ -0.42
Chrna4O70174 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chrna4O70174 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chrna4O70174 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chrna4O70174 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chrna4O70174 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chrna4O70174 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms