Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Gm11667-201ENSMUST00000119828 486 ntBASIC15.25■□□□□ 0.03
Dctn1O08788 Gm14665-201ENSMUST00000122294 557 ntBASIC15.25■□□□□ 0.03
Dctn1O08788 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.25■□□□□ 0.03
Dctn1O08788 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.25■□□□□ 0.03
Dctn1O08788 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Dctn1O08788 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.25■□□□□ 0.03
Dctn1O08788 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.25■□□□□ 0.03
Dctn1O08788 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.25■□□□□ 0.03
Dctn1O08788 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dctn1O08788 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.25■□□□□ 0.03
Dctn1O08788 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dctn1O08788 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dctn1O08788 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.25■□□□□ 0.03
Dctn1O08788 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Dctn1O08788 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dctn1O08788 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC15.24■□□□□ 0.03
Dctn1O08788 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Dctn1O08788 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.24■□□□□ 0.03
Dctn1O08788 Gm12208-201ENSMUST00000122004 163 ntBASIC15.24■□□□□ 0.03
Dctn1O08788 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.24■□□□□ 0.03
Dctn1O08788 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.24■□□□□ 0.03
Dctn1O08788 Gm44551-201ENSMUST00000208804 171 ntBASIC15.24■□□□□ 0.03
Dctn1O08788 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 AC122876.1-201ENSMUST00000217619 825 ntBASIC15.24■□□□□ 0.03
Dctn1O08788 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC15.24■□□□□ 0.03
Dctn1O08788 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.24■□□□□ 0.03
Dctn1O08788 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.24■□□□□ 0.03
Dctn1O08788 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Dctn1O08788 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Dctn1O08788 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Dctn1O08788 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.24■□□□□ 0.03
Dctn1O08788 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.24■□□□□ 0.03
Dctn1O08788 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Dctn1O08788 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.24■□□□□ 0.03
Dctn1O08788 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Dctn1O08788 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dctn1O08788 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Dctn1O08788 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.23■□□□□ 0.03
Dctn1O08788 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Dctn1O08788 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.23■□□□□ 0.03
Dctn1O08788 Gm7722-201ENSMUST00000120646 741 ntBASIC15.23■□□□□ 0.03
Dctn1O08788 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.23■□□□□ 0.03
Dctn1O08788 Gm14760-201ENSMUST00000121831 999 ntBASIC15.23■□□□□ 0.03
Dctn1O08788 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC15.23■□□□□ 0.03
Dctn1O08788 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.23■□□□□ 0.03
Dctn1O08788 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.23■□□□□ 0.03
Dctn1O08788 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Mir6546-201ENSMUST00000184460 62 ntBASIC15.23■□□□□ 0.03
Dctn1O08788 Gm3332-201ENSMUST00000189337 928 ntBASIC15.23■□□□□ 0.03
Dctn1O08788 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Olfr1347-205ENSMUST00000220413 964 ntBASIC15.23■□□□□ 0.03
Dctn1O08788 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.23■□□□□ 0.03
Dctn1O08788 Gm807-202ENSMUST00000224929 408 ntBASIC15.23■□□□□ 0.03
Dctn1O08788 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Dctn1O08788 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Dctn1O08788 Gm26448-201ENSMUST00000082446 203 ntBASIC15.23■□□□□ 0.03
Dctn1O08788 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.23■□□□□ 0.03
Dctn1O08788 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.23■□□□□ 0.03
Dctn1O08788 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.23■□□□□ 0.03
Dctn1O08788 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dctn1O08788 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.22■□□□□ 0.03
Dctn1O08788 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms