Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Gm14644-201ENSMUST00000116671 647 ntBASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3aQ9JKX8 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Gm23912-201ENSMUST00000104687 87 ntBASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Gm14109-201ENSMUST00000118814 309 ntBASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Gm14381-201ENSMUST00000122105 414 ntBASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Rprl1-201ENSMUST00000158050 327 ntBASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.9□□□□□ -0.5
Upk3aQ9JKX8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Upk3aQ9JKX8 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Upk3aQ9JKX8 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Upk3aQ9JKX8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Upk3aQ9JKX8 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Upk3aQ9JKX8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.51
Upk3aQ9JKX8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms