Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpbQ9CQC0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Gm14704-201ENSMUST00000120300 874 ntBASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Gm15429-201ENSMUST00000151268 798 ntBASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Gm18473-201ENSMUST00000220543 868 ntBASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpbQ9CQC0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Gm22189-201ENSMUST00000103822 86 ntBASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TpbpbQ9CQC0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms