Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Gm1335-201ENSMUST00000121653 386 ntBASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Gm12363-201ENSMUST00000122250 668 ntBASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Gm10268-201ENSMUST00000085340 555 ntBASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Gm22121-201ENSMUST00000175148 54 ntBASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Gm27682-201ENSMUST00000183930 110 ntBASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Gm4768-201ENSMUST00000206199 686 ntBASIC12.03□□□□□ -0.48
Rnf111Q99ML9 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Rnf111Q99ML9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rnf111Q99ML9 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf111Q99ML9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf111Q99ML9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.02□□□□□ -0.48
Rnf111Q99ML9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.02□□□□□ -0.48
Rnf111Q99ML9 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf111Q99ML9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Gm13829-201ENSMUST00000119600 138 ntBASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.02□□□□□ -0.49
Rnf111Q99ML9 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Mir339-201ENSMUST00000083659 96 ntBASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms