Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Gm44260-201ENSMUST00000204946 2094 ntBASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 CT010486.3-201ENSMUST00000224555 811 ntBASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Gm16372-201ENSMUST00000073088 450 ntBASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh18Q8VHR0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Gm16202-201ENSMUST00000117532 544 ntBASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Gm5687-201ENSMUST00000118252 640 ntBASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh18Q8VHR0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms