Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.21□□□□□ -0.46
Pcdh19Q80TF3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Gm24231-201ENSMUST00000104315 133 ntBASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Gm2260-201ENSMUST00000184965 657 ntBASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh19Q80TF3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Cog3-203ENSMUST00000227473 4197 ntBASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Gm6963-201ENSMUST00000147879 379 ntBASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Gm44958-201ENSMUST00000203734 736 ntBASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Thoc7-209ENSMUST00000225325 765 ntBASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.19□□□□□ -0.46
Pcdh19Q80TF3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms