Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 CT030652.1-201ENSMUST00000227377 1235 ntBASIC10.49□□□□□ -0.73
Rif1Q6PR54 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.49□□□□□ -0.73
Rif1Q6PR54 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.49□□□□□ -0.73
Rif1Q6PR54 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Gm23439-201ENSMUST00000104292 132 ntBASIC10.49□□□□□ -0.73
Rif1Q6PR54 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Gm16166-201ENSMUST00000118291 787 ntBASIC10.49□□□□□ -0.73
Rif1Q6PR54 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Gm24398-201ENSMUST00000157870 109 ntBASIC10.49□□□□□ -0.73
Rif1Q6PR54 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Gm5205-201ENSMUST00000182253 1003 ntBASIC10.49□□□□□ -0.73
Rif1Q6PR54 Gm27530-201ENSMUST00000184096 98 ntBASIC10.49□□□□□ -0.73
Rif1Q6PR54 Gm29651-201ENSMUST00000189088 697 ntBASIC10.49□□□□□ -0.73
Rif1Q6PR54 Gm43184-201ENSMUST00000197247 542 ntBASIC10.49□□□□□ -0.73
Rif1Q6PR54 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.49□□□□□ -0.73
Rif1Q6PR54 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rif1Q6PR54 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm23769-201ENSMUST00000104441 121 ntBASIC10.48□□□□□ -0.73
Rif1Q6PR54 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm37851-201ENSMUST00000193871 889 ntBASIC10.48□□□□□ -0.73
Rif1Q6PR54 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.48□□□□□ -0.73
Rif1Q6PR54 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm43912-201ENSMUST00000204352 538 ntBASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.48□□□□□ -0.73
Rif1Q6PR54 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms