Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm9908-201ENSMUST00000211534 448 ntBASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Gm17794-201ENSMUST00000220252 955 ntBASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Gm6244-201ENSMUST00000178732 841 ntBASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Gm27390-201ENSMUST00000184516 176 ntBASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Gm4768-201ENSMUST00000206199 686 ntBASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Gm10012-201ENSMUST00000078252 192 ntBASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Gm5356-201ENSMUST00000093326 615 ntBASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smarcd3Q6P9Z1 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Gm11424-201ENSMUST00000121929 829 ntBASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Gm24196-201ENSMUST00000179161 110 ntBASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.36□□□□□ -0.59
Smarcd3Q6P9Z1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms