Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Sox17Q61473 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Sox17Q61473 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.6□□□□□ -0.55
Sox17Q61473 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Sox17Q61473 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Sox17Q61473 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sox17Q61473 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.6□□□□□ -0.55
Sox17Q61473 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sox17Q61473 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sox17Q61473 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Sox17Q61473 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Sox17Q61473 Gm24231-201ENSMUST00000104315 133 ntBASIC11.59□□□□□ -0.55
Sox17Q61473 Gm14921-201ENSMUST00000118643 908 ntBASIC11.59□□□□□ -0.55
Sox17Q61473 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.59□□□□□ -0.55
Sox17Q61473 Gm16296-201ENSMUST00000159905 325 ntBASIC11.59□□□□□ -0.55
Sox17Q61473 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sox17Q61473 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.59□□□□□ -0.55
Sox17Q61473 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sox17Q61473 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sox17Q61473 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sox17Q61473 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.59□□□□□ -0.55
Sox17Q61473 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox17Q61473 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sox17Q61473 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sox17Q61473 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Sox17Q61473 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sox17Q61473 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Sox17Q61473 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sox17Q61473 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sox17Q61473 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox17Q61473 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sox17Q61473 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Gm15703-201ENSMUST00000120250 880 ntBASIC11.58□□□□□ -0.56
Sox17Q61473 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Gm16215-201ENSMUST00000161990 637 ntBASIC11.58□□□□□ -0.56
Sox17Q61473 Gm23363-201ENSMUST00000175024 79 ntBASIC11.58□□□□□ -0.56
Sox17Q61473 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox17Q61473 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.58□□□□□ -0.56
Sox17Q61473 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.58□□□□□ -0.56
Sox17Q61473 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Sox17Q61473 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.58□□□□□ -0.56
Sox17Q61473 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sox17Q61473 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sox17Q61473 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.58□□□□□ -0.56
Sox17Q61473 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Sox17Q61473 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms