Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.7□□□□□ -0.22
Ift88Q61371 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Ift88Q61371 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ift88Q61371 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Ift88Q61371 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.7□□□□□ -0.22
Ift88Q61371 Gm27486-201ENSMUST00000184923 80 ntBASIC13.7□□□□□ -0.22
Ift88Q61371 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.7□□□□□ -0.22
Ift88Q61371 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.7□□□□□ -0.22
Ift88Q61371 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ift88Q61371 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Ift88Q61371 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.7□□□□□ -0.22
Ift88Q61371 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.7□□□□□ -0.22
Ift88Q61371 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.7□□□□□ -0.22
Ift88Q61371 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.7□□□□□ -0.22
Ift88Q61371 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ift88Q61371 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.69□□□□□ -0.22
Ift88Q61371 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.69□□□□□ -0.22
Ift88Q61371 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.69□□□□□ -0.22
Ift88Q61371 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Gm9002-201ENSMUST00000178437 499 ntBASIC13.69□□□□□ -0.22
Ift88Q61371 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ift88Q61371 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.69□□□□□ -0.22
Ift88Q61371 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.69□□□□□ -0.22
Ift88Q61371 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ift88Q61371 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.69□□□□□ -0.22
Ift88Q61371 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ift88Q61371 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.68□□□□□ -0.22
Ift88Q61371 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.68□□□□□ -0.22
Ift88Q61371 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ift88Q61371 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Ift88Q61371 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.68□□□□□ -0.22
Ift88Q61371 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ift88Q61371 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ift88Q61371 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.68□□□□□ -0.22
Ift88Q61371 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ift88Q61371 Gm11597-201ENSMUST00000121423 964 ntBASIC13.68□□□□□ -0.22
Ift88Q61371 Gm12138-201ENSMUST00000122180 951 ntBASIC13.68□□□□□ -0.22
Ift88Q61371 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.68□□□□□ -0.22
Ift88Q61371 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.68□□□□□ -0.22
Ift88Q61371 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.68□□□□□ -0.22
Ift88Q61371 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ift88Q61371 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ift88Q61371 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.68□□□□□ -0.22
Ift88Q61371 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.68□□□□□ -0.22
Ift88Q61371 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ift88Q61371 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms