Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Gm12337-201ENSMUST00000119634 400 ntBASIC11.92□□□□□ -0.5
Col12a1Q60847 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.92□□□□□ -0.5
Col12a1Q60847 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Gm28833-201ENSMUST00000189671 559 ntBASIC11.92□□□□□ -0.5
Col12a1Q60847 Gm2448-201ENSMUST00000207080 559 ntBASIC11.92□□□□□ -0.5
Col12a1Q60847 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Col12a1Q60847 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.92□□□□□ -0.5
Col12a1Q60847 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Gm10263-201ENSMUST00000085163 300 ntBASIC11.92□□□□□ -0.5
Col12a1Q60847 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col12a1Q60847 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Col12a1Q60847 Gm11783-201ENSMUST00000119549 885 ntBASIC11.92□□□□□ -0.5
Col12a1Q60847 Gm24943-201ENSMUST00000158329 433 ntBASIC11.92□□□□□ -0.5
Col12a1Q60847 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.92□□□□□ -0.5
Col12a1Q60847 Gm8574-201ENSMUST00000203207 924 ntBASIC11.92□□□□□ -0.5
Col12a1Q60847 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.92□□□□□ -0.5
Col12a1Q60847 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.92□□□□□ -0.5
Col12a1Q60847 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col12a1Q60847 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.92□□□□□ -0.5
Col12a1Q60847 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Col12a1Q60847 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Gm17944-201ENSMUST00000186351 643 ntBASIC11.91□□□□□ -0.5
Col12a1Q60847 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col12a1Q60847 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col12a1Q60847 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Gm44315-201ENSMUST00000203041 219 ntBASIC11.91□□□□□ -0.5
Col12a1Q60847 Gm45094-201ENSMUST00000207013 617 ntBASIC11.91□□□□□ -0.5
Col12a1Q60847 Gm45113-201ENSMUST00000207518 165 ntBASIC11.91□□□□□ -0.5
Col12a1Q60847 Gm9204-201ENSMUST00000212641 947 ntBASIC11.91□□□□□ -0.5
Col12a1Q60847 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col12a1Q60847 Mir1905-201ENSMUST00000122779 82 ntBASIC11.91□□□□□ -0.5
Col12a1Q60847 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.91□□□□□ -0.5
Col12a1Q60847 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col12a1Q60847 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Col12a1Q60847 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col12a1Q60847 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col12a1Q60847 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Col12a1Q60847 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.9□□□□□ -0.5
Col12a1Q60847 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Col12a1Q60847 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.9□□□□□ -0.5
Col12a1Q60847 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.9□□□□□ -0.5
Col12a1Q60847 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.9□□□□□ -0.5
Col12a1Q60847 Gm7150-201ENSMUST00000122032 981 ntBASIC11.9□□□□□ -0.5
Col12a1Q60847 Gm25677-201ENSMUST00000174983 72 ntBASIC11.9□□□□□ -0.5
Col12a1Q60847 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.9□□□□□ -0.5
Col12a1Q60847 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col12a1Q60847 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.9□□□□□ -0.5
Col12a1Q60847 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Gm25554-201ENSMUST00000158075 113 ntBASIC11.9□□□□□ -0.5
Col12a1Q60847 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Col12a1Q60847 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 293.7 ms