Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.68□□□□□ -0.54
Brf2Q3UAW9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Gm25261-201ENSMUST00000157416 134 ntBASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Gm24548-201ENSMUST00000158650 108 ntBASIC11.67□□□□□ -0.54
Brf2Q3UAW9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Brf2Q3UAW9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Gm12314-201ENSMUST00000118104 538 ntBASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Gm11425-201ENSMUST00000119608 498 ntBASIC11.66□□□□□ -0.54
Brf2Q3UAW9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Gm5370-201ENSMUST00000187187 574 ntBASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Gm9396-201ENSMUST00000076703 567 ntBASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms