Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nhej1Q3KNJ2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.21□□□□□ -0.29
Nhej1Q3KNJ2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nhej1Q3KNJ2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nhej1Q3KNJ2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Nhej1Q3KNJ2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nhej1Q3KNJ2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nhej1Q3KNJ2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nhej1Q3KNJ2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nhej1Q3KNJ2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nhej1Q3KNJ2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nhej1Q3KNJ2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nhej1Q3KNJ2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nhej1Q3KNJ2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Gm27243-201ENSMUST00000183964 521 ntBASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Gm6745-201ENSMUST00000199216 526 ntBASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.2□□□□□ -0.3
Nhej1Q3KNJ2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Gm24644-201ENSMUST00000157114 139 ntBASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Gm27486-201ENSMUST00000184923 80 ntBASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nhej1Q3KNJ2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhej1Q3KNJ2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.18□□□□□ -0.3
Nhej1Q3KNJ2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhej1Q3KNJ2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhej1Q3KNJ2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nhej1Q3KNJ2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms