Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Xrn1P97789 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC17.2■□□□□ 0.34
Xrn1P97789 Gm15172-201ENSMUST00000118945 1046 ntBASIC17.2■□□□□ 0.34
Xrn1P97789 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC17.2■□□□□ 0.34
Xrn1P97789 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC17.2■□□□□ 0.34
Xrn1P97789 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC17.2■□□□□ 0.34
Xrn1P97789 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC17.2■□□□□ 0.34
Xrn1P97789 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Xrn1P97789 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Xrn1P97789 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 Gm37437-201ENSMUST00000194451 1937 ntBASIC17.2■□□□□ 0.34
Xrn1P97789 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Xrn1P97789 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Xrn1P97789 Gm14441-201ENSMUST00000121960 540 ntBASIC17.19■□□□□ 0.34
Xrn1P97789 Gm6114-201ENSMUST00000182472 968 ntBASIC17.19■□□□□ 0.34
Xrn1P97789 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC17.19■□□□□ 0.34
Xrn1P97789 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Xrn1P97789 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC17.19■□□□□ 0.34
Xrn1P97789 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Xrn1P97789 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Xrn1P97789 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC17.19■□□□□ 0.34
Xrn1P97789 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC17.19■□□□□ 0.34
Xrn1P97789 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Xrn1P97789 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Xrn1P97789 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Xrn1P97789 Gm25053-201ENSMUST00000103982 133 ntBASIC17.18■□□□□ 0.34
Xrn1P97789 Gm25922-201ENSMUST00000104281 130 ntBASIC17.18■□□□□ 0.34
Xrn1P97789 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Xrn1P97789 Gm14395-201ENSMUST00000120494 563 ntBASIC17.18■□□□□ 0.34
Xrn1P97789 Gm13117-201ENSMUST00000120894 691 ntBASIC17.18■□□□□ 0.34
Xrn1P97789 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Gm24679-201ENSMUST00000158762 111 ntBASIC17.18■□□□□ 0.34
Xrn1P97789 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC17.18■□□□□ 0.34
Xrn1P97789 Gm20495-201ENSMUST00000173902 235 ntBASIC17.18■□□□□ 0.34
Xrn1P97789 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Xrn1P97789 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC17.18■□□□□ 0.34
Xrn1P97789 Gm25053-202ENSMUST00000199731 132 ntBASIC17.18■□□□□ 0.34
Xrn1P97789 Gm7082-201ENSMUST00000209880 969 ntBASIC17.18■□□□□ 0.34
Xrn1P97789 Gm10263-201ENSMUST00000085163 300 ntBASIC17.18■□□□□ 0.34
Xrn1P97789 Gm36970-201ENSMUST00000193688 1859 ntBASIC17.18■□□□□ 0.34
Xrn1P97789 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Xrn1P97789 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC17.18■□□□□ 0.34
Xrn1P97789 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC17.18■□□□□ 0.34
Xrn1P97789 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrn1P97789 Gm5780-201ENSMUST00000217774 1834 ntBASIC17.17■□□□□ 0.34
Xrn1P97789 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xrn1P97789 Adra1a-206ENSMUST00000225182 2337 ntBASIC17.17■□□□□ 0.34
Xrn1P97789 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms