Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Gm22058-201ENSMUST00000083393 310 ntBASIC11.53□□□□□ -0.56
Thbs1P35441 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Thbs1P35441 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.53□□□□□ -0.56
Thbs1P35441 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.53□□□□□ -0.56
Thbs1P35441 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.53□□□□□ -0.56
Thbs1P35441 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs1P35441 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs1P35441 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs1P35441 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs1P35441 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs1P35441 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
Thbs1P35441 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.52□□□□□ -0.56
Thbs1P35441 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.52□□□□□ -0.56
Thbs1P35441 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs1P35441 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs1P35441 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs1P35441 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs1P35441 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Thbs1P35441 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Thbs1P35441 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.52□□□□□ -0.57
Thbs1P35441 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Thbs1P35441 Gm5187-201ENSMUST00000117317 991 ntBASIC11.52□□□□□ -0.57
Thbs1P35441 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Thbs1P35441 Gm43084-201ENSMUST00000200696 947 ntBASIC11.52□□□□□ -0.57
Thbs1P35441 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.52□□□□□ -0.57
Thbs1P35441 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Thbs1P35441 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Thbs1P35441 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.52□□□□□ -0.57
Thbs1P35441 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.52□□□□□ -0.57
Thbs1P35441 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.52□□□□□ -0.57
Thbs1P35441 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Thbs1P35441 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs1P35441 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Thbs1P35441 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Thbs1P35441 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.51□□□□□ -0.57
Thbs1P35441 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Thbs1P35441 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.51□□□□□ -0.57
Thbs1P35441 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 Mir1247-201ENSMUST00000116706 82 ntBASIC11.51□□□□□ -0.57
Thbs1P35441 Gm15198-201ENSMUST00000117283 177 ntBASIC11.51□□□□□ -0.57
Thbs1P35441 Gm12314-201ENSMUST00000118104 538 ntBASIC11.51□□□□□ -0.57
Thbs1P35441 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.51□□□□□ -0.57
Thbs1P35441 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.51□□□□□ -0.57
Thbs1P35441 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC11.51□□□□□ -0.57
Thbs1P35441 Gm7809-201ENSMUST00000153199 742 ntBASIC11.51□□□□□ -0.57
Thbs1P35441 Gm23119-201ENSMUST00000158610 140 ntBASIC11.51□□□□□ -0.57
Thbs1P35441 Gm24548-201ENSMUST00000158650 108 ntBASIC11.51□□□□□ -0.57
Thbs1P35441 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.51□□□□□ -0.57
Thbs1P35441 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs1P35441 Gm8738-201ENSMUST00000172606 329 ntBASIC11.51□□□□□ -0.57
Thbs1P35441 Gm3890-201ENSMUST00000182416 207 ntBASIC11.51□□□□□ -0.57
Thbs1P35441 Gm42599-201ENSMUST00000201308 469 ntBASIC11.51□□□□□ -0.57
Thbs1P35441 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.51□□□□□ -0.57
Thbs1P35441 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms