Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn1P18608 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.33□□□□□ -0.6
Hmgn1P18608 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn1P18608 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.32□□□□□ -0.6
Hmgn1P18608 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Gm4768-201ENSMUST00000206199 686 ntBASIC11.32□□□□□ -0.6
Hmgn1P18608 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.32□□□□□ -0.6
Hmgn1P18608 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Gm15823-201ENSMUST00000064305 670 ntBASIC11.32□□□□□ -0.6
Hmgn1P18608 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn1P18608 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.32□□□□□ -0.6
Hmgn1P18608 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn1P18608 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hmgn1P18608 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.31□□□□□ -0.6
Hmgn1P18608 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hmgn1P18608 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Hmgn1P18608 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmgn1P18608 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.31□□□□□ -0.6
Hmgn1P18608 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Gm15920-201ENSMUST00000118998 402 ntBASIC11.31□□□□□ -0.6
Hmgn1P18608 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Hmgn1P18608 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Gm9022-201ENSMUST00000182482 992 ntBASIC11.31□□□□□ -0.6
Hmgn1P18608 Gm27243-201ENSMUST00000183964 521 ntBASIC11.31□□□□□ -0.6
Hmgn1P18608 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hmgn1P18608 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Hmgn1P18608 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Hmgn1P18608 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hmgn1P18608 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn1P18608 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmgn1P18608 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmgn1P18608 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmgn1P18608 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmgn1P18608 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmgn1P18608 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmgn1P18608 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.3□□□□□ -0.6
Hmgn1P18608 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmgn1P18608 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hmgn1P18608 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmgn1P18608 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmgn1P18608 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms