Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.91□□□□□ -0.5
Cntn1P12960 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cntn1P12960 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Cntn1P12960 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cntn1P12960 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.9□□□□□ -0.5
Cntn1P12960 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.9□□□□□ -0.5
Cntn1P12960 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.9□□□□□ -0.5
Cntn1P12960 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Cntn1P12960 Gm42937-201ENSMUST00000197360 752 ntBASIC11.9□□□□□ -0.5
Cntn1P12960 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.9□□□□□ -0.5
Cntn1P12960 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.9□□□□□ -0.5
Cntn1P12960 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.9□□□□□ -0.5
Cntn1P12960 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.9□□□□□ -0.5
Cntn1P12960 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.9□□□□□ -0.5
Cntn1P12960 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cntn1P12960 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.9□□□□□ -0.51
Cntn1P12960 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cntn1P12960 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cntn1P12960 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.89□□□□□ -0.51
Cntn1P12960 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cntn1P12960 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.89□□□□□ -0.51
Cntn1P12960 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.89□□□□□ -0.51
Cntn1P12960 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.89□□□□□ -0.51
Cntn1P12960 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.89□□□□□ -0.51
Cntn1P12960 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.89□□□□□ -0.51
Cntn1P12960 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Gm25700-201ENSMUST00000177693 110 ntBASIC11.89□□□□□ -0.51
Cntn1P12960 Gm18304-201ENSMUST00000189162 546 ntBASIC11.89□□□□□ -0.51
Cntn1P12960 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.89□□□□□ -0.51
Cntn1P12960 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.89□□□□□ -0.51
Cntn1P12960 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Gzmn-202ENSMUST00000225535 989 ntBASIC11.89□□□□□ -0.51
Cntn1P12960 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.89□□□□□ -0.51
Cntn1P12960 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.89□□□□□ -0.51
Cntn1P12960 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.89□□□□□ -0.51
Cntn1P12960 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cntn1P12960 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.89□□□□□ -0.51
Cntn1P12960 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cntn1P12960 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms