Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Ccl3P10855 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.92□□□□□ -0.66
Ccl3P10855 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccl3P10855 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Ccl3P10855 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccl3P10855 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Gm11628-201ENSMUST00000117568 171 ntBASIC10.92□□□□□ -0.66
Ccl3P10855 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.92□□□□□ -0.66
Ccl3P10855 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.92□□□□□ -0.66
Ccl3P10855 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.92□□□□□ -0.66
Ccl3P10855 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.92□□□□□ -0.66
Ccl3P10855 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ccl3P10855 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ccl3P10855 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ccl3P10855 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.92□□□□□ -0.66
Ccl3P10855 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccl3P10855 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.92□□□□□ -0.66
Ccl3P10855 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.92□□□□□ -0.66
Ccl3P10855 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.92□□□□□ -0.66
Ccl3P10855 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Ccl3P10855 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Ccl3P10855 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ccl3P10855 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ccl3P10855 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ccl3P10855 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ccl3P10855 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ccl3P10855 Gm26286-201ENSMUST00000104166 134 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.91□□□□□ -0.66
Ccl3P10855 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Gm13809-201ENSMUST00000117921 597 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Gm11511-201ENSMUST00000118146 540 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Gm15573-201ENSMUST00000119487 540 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.91□□□□□ -0.66
Ccl3P10855 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.91□□□□□ -0.66
Ccl3P10855 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.91□□□□□ -0.66
Ccl3P10855 Gm9540-201ENSMUST00000188230 478 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Gm8365-201ENSMUST00000197334 648 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Gm45550-201ENSMUST00000209380 946 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Gm9132-201ENSMUST00000210182 832 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccl3P10855 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms