Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.7
Igh-VJ558P01758 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Gm25043-201ENSMUST00000158604 212 ntBASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Mospd4-201ENSMUST00000180618 576 ntBASIC10.7□□□□□ -0.7
Igh-VJ558P01758 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Gm43118-201ENSMUST00000199149 775 ntBASIC10.7□□□□□ -0.7
Igh-VJ558P01758 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.7□□□□□ -0.7
Igh-VJ558P01758 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Igh-VJ558P01758 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Gm24934-201ENSMUST00000103764 111 ntBASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Gm11793-201ENSMUST00000120433 981 ntBASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Gm13786-201ENSMUST00000122371 333 ntBASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.69□□□□□ -0.7
Igh-VJ558P01758 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Gm18062-201ENSMUST00000208020 547 ntBASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Gm18055-201ENSMUST00000208254 547 ntBASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.69□□□□□ -0.7
Igh-VJ558P01758 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Gm25857-201ENSMUST00000082788 129 ntBASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igh-VJ558P01758 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms