Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.73□□□□□ -0.37
Atf6F6VAN0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.73□□□□□ -0.37
Atf6F6VAN0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.73□□□□□ -0.37
Atf6F6VAN0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.73□□□□□ -0.37
Atf6F6VAN0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Atf6F6VAN0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.72□□□□□ -0.37
Atf6F6VAN0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.72□□□□□ -0.37
Atf6F6VAN0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.72□□□□□ -0.37
Atf6F6VAN0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Gm39404-201ENSMUST00000216350 313 ntBASIC12.72□□□□□ -0.37
Atf6F6VAN0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6F6VAN0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.71□□□□□ -0.37
Atf6F6VAN0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.71□□□□□ -0.37
Atf6F6VAN0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms