Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpxQ9JHS4 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
ClpxQ9JHS4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
ClpxQ9JHS4 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
ClpxQ9JHS4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
ClpxQ9JHS4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
ClpxQ9JHS4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
ClpxQ9JHS4 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
ClpxQ9JHS4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.4□□□□□ -0.59
ClpxQ9JHS4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
ClpxQ9JHS4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Gm8463-201ENSMUST00000208573 613 ntBASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpxQ9JHS4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Cog3-203ENSMUST00000227473 4197 ntBASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Gm6152-201ENSMUST00000151704 340 ntBASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Gm35960-201ENSMUST00000202712 767 ntBASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Gm5035-201ENSMUST00000215581 927 ntBASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Gm18473-201ENSMUST00000220543 868 ntBASIC11.38□□□□□ -0.59
ClpxQ9JHS4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpxQ9JHS4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms