Protein–RNA interactions for Protein: Q9ES56

Trappc4, Trafficking protein particle complex subunit 4, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc4Q9ES56 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trappc4Q9ES56 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trappc4Q9ES56 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trappc4Q9ES56 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.6□□□□□ -0.55
Trappc4Q9ES56 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trappc4Q9ES56 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trappc4Q9ES56 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trappc4Q9ES56 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trappc4Q9ES56 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trappc4Q9ES56 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trappc4Q9ES56 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trappc4Q9ES56 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trappc4Q9ES56 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trappc4Q9ES56 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Gm11793-201ENSMUST00000120433 981 ntBASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Mospd4-201ENSMUST00000180618 576 ntBASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Gm7399-201ENSMUST00000032395 858 ntBASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trappc4Q9ES56 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trappc4Q9ES56 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trappc4Q9ES56 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.58□□□□□ -0.55
Trappc4Q9ES56 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.58□□□□□ -0.55
Trappc4Q9ES56 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trappc4Q9ES56 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Gm15703-201ENSMUST00000120250 880 ntBASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Gm13786-201ENSMUST00000122371 333 ntBASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.58□□□□□ -0.56
Trappc4Q9ES56 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.58□□□□□ -0.56
Trappc4Q9ES56 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms