Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC090616.6-203ENST00000579186 1945 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AL138799.1-201ENST00000448213 1675 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC105917.1-201ENST00000506637 2539 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 RPL13AP20-201ENST00000459725 609 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 GAPDHP40-201ENST00000505218 1006 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 PTP4A1P2-201ENST00000546033 454 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 RN7SL718P-201ENST00000581254 303 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 RN7SL219P-201ENST00000582872 296 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC015936.2-201ENST00000593177 259 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 ECM1P1-201ENST00000604092 1279 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AL353729.2-201ENST00000605859 1249 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AL022328.1-201ENST00000610050 478 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC022079.1-201ENST00000621546 602 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms