Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Gm6754-201ENSMUST00000117124 913 ntBASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Gm16177-201ENSMUST00000120728 718 ntBASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Gm14760-201ENSMUST00000121831 999 ntBASIC12.06□□□□□ -0.48
Rnf111Q99ML9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Gm15824-201ENSMUST00000119516 955 ntBASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Gm12291-201ENSMUST00000121627 311 ntBASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Gm7029-201ENSMUST00000173226 450 ntBASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Gm43818-201ENSMUST00000200605 466 ntBASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Gm40466-201ENSMUST00000212174 422 ntBASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Gm8227-201ENSMUST00000223306 571 ntBASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Gm19163-201ENSMUST00000223313 780 ntBASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf111Q99ML9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.04□□□□□ -0.48
Rnf111Q99ML9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms