Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Gm8737-201ENSMUST00000122208 642 ntBASIC15.27■□□□□ 0.04
RtcbQ99LF4 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RtcbQ99LF4 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Gm42518-201ENSMUST00000196277 938 ntBASIC15.27■□□□□ 0.04
RtcbQ99LF4 Gm8956-201ENSMUST00000203939 825 ntBASIC15.27■□□□□ 0.04
RtcbQ99LF4 Gm44980-201ENSMUST00000205826 314 ntBASIC15.27■□□□□ 0.04
RtcbQ99LF4 Gm45575-201ENSMUST00000210283 548 ntBASIC15.27■□□□□ 0.04
RtcbQ99LF4 AC115122.1-201ENSMUST00000224850 1040 ntBASIC15.27■□□□□ 0.04
RtcbQ99LF4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RtcbQ99LF4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RtcbQ99LF4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RtcbQ99LF4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RtcbQ99LF4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RtcbQ99LF4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RtcbQ99LF4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RtcbQ99LF4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RtcbQ99LF4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
RtcbQ99LF4 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RtcbQ99LF4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Gm13384-201ENSMUST00000117166 1344 ntBASIC15.26■□□□□ 0.03
RtcbQ99LF4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Gm15352-201ENSMUST00000118696 270 ntBASIC15.26■□□□□ 0.03
RtcbQ99LF4 Gm13182-201ENSMUST00000122241 312 ntBASIC15.26■□□□□ 0.03
RtcbQ99LF4 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC15.26■□□□□ 0.03
RtcbQ99LF4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Gm6485-201ENSMUST00000160676 439 ntBASIC15.26■□□□□ 0.03
RtcbQ99LF4 Gm38228-201ENSMUST00000193169 1293 ntBASIC15.26■□□□□ 0.03
RtcbQ99LF4 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC15.26■□□□□ 0.03
RtcbQ99LF4 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Gm18711-201ENSMUST00000199341 750 ntBASIC15.26■□□□□ 0.03
RtcbQ99LF4 Gm3793-201ENSMUST00000204973 672 ntBASIC15.26■□□□□ 0.03
RtcbQ99LF4 Gm6430-201ENSMUST00000054664 1248 ntBASIC15.26■□□□□ 0.03
RtcbQ99LF4 Gm5705-201ENSMUST00000066241 711 ntBASIC15.26■□□□□ 0.03
RtcbQ99LF4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.26■□□□□ 0.03
RtcbQ99LF4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC15.26■□□□□ 0.03
RtcbQ99LF4 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.25■□□□□ 0.03
RtcbQ99LF4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.25■□□□□ 0.03
RtcbQ99LF4 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Gm11949-201ENSMUST00000117640 372 ntBASIC15.25■□□□□ 0.03
RtcbQ99LF4 Gm15566-201ENSMUST00000121130 590 ntBASIC15.25■□□□□ 0.03
RtcbQ99LF4 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Gm23045-201ENSMUST00000175041 96 ntBASIC15.25■□□□□ 0.03
RtcbQ99LF4 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Gm9645-201ENSMUST00000197131 792 ntBASIC15.25■□□□□ 0.03
RtcbQ99LF4 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC15.25■□□□□ 0.03
RtcbQ99LF4 AC121960.1-201ENSMUST00000227982 564 ntBASIC15.25■□□□□ 0.03
RtcbQ99LF4 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms