Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Syne4Q8CII8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14□□□□□ -0.17
Syne4Q8CII8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Syne4Q8CII8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Gm11663-201ENSMUST00000117888 290 ntBASIC14□□□□□ -0.17
Syne4Q8CII8 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14□□□□□ -0.17
Syne4Q8CII8 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14□□□□□ -0.17
Syne4Q8CII8 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Syne4Q8CII8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Syne4Q8CII8 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Syne4Q8CII8 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Gm23771-201ENSMUST00000178702 110 ntBASIC14□□□□□ -0.17
Syne4Q8CII8 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Mir7076-201ENSMUST00000183519 74 ntBASIC14□□□□□ -0.17
Syne4Q8CII8 Gm27910-201ENSMUST00000185004 107 ntBASIC14□□□□□ -0.17
Syne4Q8CII8 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14□□□□□ -0.17
Syne4Q8CII8 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14□□□□□ -0.17
Syne4Q8CII8 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Syne4Q8CII8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Gm42769-201ENSMUST00000198576 1659 ntBASIC14□□□□□ -0.17
Syne4Q8CII8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Syne4Q8CII8 Gm11405-201ENSMUST00000118689 1556 ntBASIC14□□□□□ -0.17
Syne4Q8CII8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14□□□□□ -0.17
Syne4Q8CII8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Syne4Q8CII8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne4Q8CII8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Gm22138-201ENSMUST00000158748 128 ntBASIC13.99□□□□□ -0.17
Syne4Q8CII8 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Gm9797-202ENSMUST00000218003 294 ntBASIC13.99□□□□□ -0.17
Syne4Q8CII8 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.99□□□□□ -0.17
Syne4Q8CII8 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms