Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Gm23949-201ENSMUST00000104027 127 ntBASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Gm12380-201ENSMUST00000119012 544 ntBASIC13.17□□□□□ -0.3
Rd3Q8BRE0 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Mir1943-201ENSMUST00000158276 73 ntBASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Gm24514-201ENSMUST00000174961 285 ntBASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.17□□□□□ -0.3
Rd3Q8BRE0 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rd3Q8BRE0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 AY036118-201ENSMUST00000200021 923 ntBASIC13.16□□□□□ -0.3
Rd3Q8BRE0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Spcs1-203ENSMUST00000226374 592 ntBASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rd3Q8BRE0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms