Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm26831-201ENSMUST00000181458 1380 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm13392-201ENSMUST00000117708 150 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm6447-201ENSMUST00000118905 835 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm14660-201ENSMUST00000119809 575 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm13924-201ENSMUST00000119899 486 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm16147-201ENSMUST00000162143 373 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm13147-202ENSMUST00000177526 1173 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Proscos-202ENSMUST00000178990 666 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm42619-201ENSMUST00000197564 1136 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm17838-201ENSMUST00000205872 876 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm8598-201ENSMUST00000221184 836 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 AC154634.2-201ENSMUST00000225983 1184 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC9.42□□□□□ -0.9
Foxc1Q61572 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Fxr1-202ENSMUST00000167354 1986 ntTSL 5 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.41□□□□□ -0.9
Foxc1Q61572 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC9.41□□□□□ -0.9
Foxc1Q61572 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC9.41□□□□□ -0.9
Foxc1Q61572 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.41□□□□□ -0.9
Foxc1Q61572 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Gm11803-201ENSMUST00000119966 444 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 Gm14957-201ENSMUST00000121069 817 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.41□□□□□ -0.9
Foxc1Q61572 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC9.41□□□□□ -0.9
Foxc1Q61572 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Mir7221-201ENSMUST00000184009 72 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Gm42693-201ENSMUST00000196779 631 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 Gm43818-201ENSMUST00000200605 466 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.41□□□□□ -0.9
Foxc1Q61572 AC161250.1-201ENSMUST00000213426 1111 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 AC159896.2-201ENSMUST00000214753 269 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 AC154319.1-201ENSMUST00000216330 312 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 AC153532.1-201ENSMUST00000218126 1111 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 AL589735.1-201ENSMUST00000224353 270 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 AC117949.2-201ENSMUST00000225900 584 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Foxc1Q61572 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms