Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.03□□□□□ -0.48
Msx2Q03358 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Msx2Q03358 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.03□□□□□ -0.48
Msx2Q03358 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Msx2Q03358 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Msx2Q03358 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.03□□□□□ -0.48
Msx2Q03358 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.03□□□□□ -0.48
Msx2Q03358 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.03□□□□□ -0.48
Msx2Q03358 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.03□□□□□ -0.48
Msx2Q03358 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.03□□□□□ -0.48
Msx2Q03358 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.03□□□□□ -0.48
Msx2Q03358 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.03□□□□□ -0.48
Msx2Q03358 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.03□□□□□ -0.48
Msx2Q03358 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msx2Q03358 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Msx2Q03358 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Msx2Q03358 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.03□□□□□ -0.48
Msx2Q03358 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.03□□□□□ -0.48
Msx2Q03358 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx2Q03358 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msx2Q03358 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msx2Q03358 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msx2Q03358 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.02□□□□□ -0.48
Msx2Q03358 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.02□□□□□ -0.48
Msx2Q03358 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msx2Q03358 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msx2Q03358 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Msx2Q03358 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msx2Q03358 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.02□□□□□ -0.48
Msx2Q03358 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Msx2Q03358 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Msx2Q03358 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.02□□□□□ -0.49
Msx2Q03358 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.02□□□□□ -0.49
Msx2Q03358 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.02□□□□□ -0.49
Msx2Q03358 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Msx2Q03358 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Msx2Q03358 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.02□□□□□ -0.49
Msx2Q03358 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.02□□□□□ -0.49
Msx2Q03358 Gm16215-201ENSMUST00000161990 637 ntBASIC12.02□□□□□ -0.49
Msx2Q03358 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.02□□□□□ -0.49
Msx2Q03358 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.02□□□□□ -0.49
Msx2Q03358 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Gm5867-201ENSMUST00000063197 592 ntBASIC12.02□□□□□ -0.49
Msx2Q03358 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.02□□□□□ -0.49
Msx2Q03358 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.02□□□□□ -0.49
Msx2Q03358 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.02□□□□□ -0.49
Msx2Q03358 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.02□□□□□ -0.49
Msx2Q03358 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.02□□□□□ -0.49
Msx2Q03358 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Msx2Q03358 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Msx2Q03358 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.02□□□□□ -0.49
Msx2Q03358 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Msx2Q03358 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx2Q03358 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms