Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Otx1P80205 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Otx1P80205 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.72□□□□□ -0.69
Otx1P80205 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.72□□□□□ -0.69
Otx1P80205 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Otx1P80205 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.72□□□□□ -0.69
Otx1P80205 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.72□□□□□ -0.69
Otx1P80205 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.72□□□□□ -0.69
Otx1P80205 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Gm27390-201ENSMUST00000184516 176 ntBASIC10.72□□□□□ -0.69
Otx1P80205 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.72□□□□□ -0.69
Otx1P80205 Gm38158-201ENSMUST00000194617 339 ntBASIC10.72□□□□□ -0.69
Otx1P80205 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.72□□□□□ -0.69
Otx1P80205 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.72□□□□□ -0.69
Otx1P80205 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.72□□□□□ -0.69
Otx1P80205 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.72□□□□□ -0.69
Otx1P80205 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Otx1P80205 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Otx1P80205 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Otx1P80205 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otx1P80205 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Otx1P80205 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Otx1P80205 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Gm6023-201ENSMUST00000118217 606 ntBASIC10.71□□□□□ -0.69
Otx1P80205 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Otx1P80205 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.71□□□□□ -0.69
Otx1P80205 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.71□□□□□ -0.69
Otx1P80205 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Gm27516-201ENSMUST00000184237 98 ntBASIC10.71□□□□□ -0.69
Otx1P80205 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.71□□□□□ -0.69
Otx1P80205 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.71□□□□□ -0.69
Otx1P80205 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.71□□□□□ -0.69
Otx1P80205 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Otx1P80205 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.71□□□□□ -0.69
Otx1P80205 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Gm10076-201ENSMUST00000073238 384 ntBASIC10.71□□□□□ -0.69
Otx1P80205 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Otx1P80205 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms