Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.03□□□□□ -0.8
Sssca1P56873 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Sssca1P56873 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sssca1P56873 Map1b-203ENSMUST00000223725 2669 ntBASIC10.02□□□□□ -0.8
Sssca1P56873 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.8
Sssca1P56873 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sssca1P56873 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.02□□□□□ -0.81
Sssca1P56873 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.02□□□□□ -0.81
Sssca1P56873 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Sssca1P56873 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.02□□□□□ -0.81
Sssca1P56873 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC10.02□□□□□ -0.81
Sssca1P56873 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.02□□□□□ -0.81
Sssca1P56873 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.02□□□□□ -0.81
Sssca1P56873 Gm22121-201ENSMUST00000175148 54 ntBASIC10.02□□□□□ -0.81
Sssca1P56873 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Sssca1P56873 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC10.02□□□□□ -0.81
Sssca1P56873 Gm15823-201ENSMUST00000064305 670 ntBASIC10.02□□□□□ -0.81
Sssca1P56873 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
Sssca1P56873 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sssca1P56873 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.01□□□□□ -0.81
Sssca1P56873 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Sssca1P56873 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.01□□□□□ -0.81
Sssca1P56873 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Sssca1P56873 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sssca1P56873 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.01□□□□□ -0.81
Sssca1P56873 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.01□□□□□ -0.81
Sssca1P56873 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Gm12859-201ENSMUST00000117834 427 ntBASIC10.01□□□□□ -0.81
Sssca1P56873 Gm15703-201ENSMUST00000120250 880 ntBASIC10.01□□□□□ -0.81
Sssca1P56873 Gm16479-201ENSMUST00000121706 932 ntBASIC10.01□□□□□ -0.81
Sssca1P56873 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Sssca1P56873 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.01□□□□□ -0.81
Sssca1P56873 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.01□□□□□ -0.81
Sssca1P56873 Gm37922-201ENSMUST00000195596 455 ntBASIC10.01□□□□□ -0.81
Sssca1P56873 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.01□□□□□ -0.81
Sssca1P56873 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.01□□□□□ -0.81
Sssca1P56873 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.01□□□□□ -0.81
Sssca1P56873 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.01□□□□□ -0.81
Sssca1P56873 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.01□□□□□ -0.81
Sssca1P56873 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.01□□□□□ -0.81
Sssca1P56873 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sssca1P56873 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms