Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Ephb3P54754 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13□□□□□ -0.33
Ephb3P54754 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13□□□□□ -0.33
Ephb3P54754 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ephb3P54754 Gm807-202ENSMUST00000224929 408 ntBASIC13□□□□□ -0.33
Ephb3P54754 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ephb3P54754 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ephb3P54754 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ephb3P54754 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13□□□□□ -0.33
Ephb3P54754 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ephb3P54754 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Ephb3P54754 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ephb3P54754 Gm30238-201ENSMUST00000195528 2603 ntBASIC13□□□□□ -0.33
Ephb3P54754 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ephb3P54754 Gm43721-201ENSMUST00000199677 2313 ntBASIC13□□□□□ -0.33
Ephb3P54754 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ephb3P54754 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13□□□□□ -0.33
Ephb3P54754 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Ephb3P54754 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ephb3P54754 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ephb3P54754 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ephb3P54754 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ephb3P54754 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ephb3P54754 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Ephb3P54754 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ephb3P54754 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.99□□□□□ -0.33
Ephb3P54754 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.99□□□□□ -0.33
Ephb3P54754 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ephb3P54754 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.99□□□□□ -0.33
Ephb3P54754 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.99□□□□□ -0.33
Ephb3P54754 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ephb3P54754 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.99□□□□□ -0.33
Ephb3P54754 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.99□□□□□ -0.33
Ephb3P54754 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Ephb3P54754 Gm15703-201ENSMUST00000120250 880 ntBASIC12.99□□□□□ -0.33
Ephb3P54754 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.99□□□□□ -0.33
Ephb3P54754 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Gm28324-201ENSMUST00000187913 264 ntBASIC12.99□□□□□ -0.33
Ephb3P54754 Gm18304-201ENSMUST00000189162 546 ntBASIC12.99□□□□□ -0.33
Ephb3P54754 Gm3332-201ENSMUST00000189337 928 ntBASIC12.99□□□□□ -0.33
Ephb3P54754 Gm6905-201ENSMUST00000205729 511 ntBASIC12.99□□□□□ -0.33
Ephb3P54754 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.99□□□□□ -0.33
Ephb3P54754 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.99□□□□□ -0.33
Ephb3P54754 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.99□□□□□ -0.33
Ephb3P54754 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.99□□□□□ -0.33
Ephb3P54754 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.99□□□□□ -0.33
Ephb3P54754 Gm26448-201ENSMUST00000082446 203 ntBASIC12.99□□□□□ -0.33
Ephb3P54754 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.99□□□□□ -0.33
Ephb3P54754 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ephb3P54754 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ephb3P54754 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.99□□□□□ -0.33
Ephb3P54754 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ephb3P54754 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.98□□□□□ -0.33
Ephb3P54754 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Ephb3P54754 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ephb3P54754 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Ephb3P54754 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Ephb3P54754 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ephb3P54754 Gm8199-201ENSMUST00000121323 823 ntBASIC12.98□□□□□ -0.33
Ephb3P54754 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.98□□□□□ -0.33
Ephb3P54754 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.98□□□□□ -0.33
Ephb3P54754 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.98□□□□□ -0.33
Ephb3P54754 Gm23153-201ENSMUST00000175323 313 ntBASIC12.98□□□□□ -0.33
Ephb3P54754 Gm25951-201ENSMUST00000175330 64 ntBASIC12.98□□□□□ -0.33
Ephb3P54754 Gm9358-201ENSMUST00000183067 927 ntBASIC12.98□□□□□ -0.33
Ephb3P54754 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms