Protein–RNA interactions for Protein: P54728

Rad23b, UV excision repair protein RAD23 homolog B, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad23bP54728 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rad23bP54728 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rad23bP54728 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rad23bP54728 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rad23bP54728 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rad23bP54728 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rad23bP54728 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.36■□□□□ 0.05
Rad23bP54728 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rad23bP54728 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rad23bP54728 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rad23bP54728 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rad23bP54728 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.35■□□□□ 0.05
Rad23bP54728 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rad23bP54728 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Gm12783-201ENSMUST00000121425 397 ntBASIC15.35■□□□□ 0.05
Rad23bP54728 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.35■□□□□ 0.05
Rad23bP54728 Gm18159-201ENSMUST00000174516 1070 ntBASIC15.35■□□□□ 0.05
Rad23bP54728 Gm9645-201ENSMUST00000197131 792 ntBASIC15.35■□□□□ 0.05
Rad23bP54728 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.35■□□□□ 0.05
Rad23bP54728 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.35■□□□□ 0.05
Rad23bP54728 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.35■□□□□ 0.05
Rad23bP54728 Gm19009-201ENSMUST00000223072 823 ntBASIC15.35■□□□□ 0.05
Rad23bP54728 CT025553.1-201ENSMUST00000226292 299 ntBASIC15.35■□□□□ 0.05
Rad23bP54728 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.35■□□□□ 0.05
Rad23bP54728 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rad23bP54728 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rad23bP54728 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Rad23bP54728 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.34■□□□□ 0.05
Rad23bP54728 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rad23bP54728 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Rad23bP54728 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC15.34■□□□□ 0.05
Rad23bP54728 Gm11979-201ENSMUST00000119629 743 ntBASIC15.34■□□□□ 0.05
Rad23bP54728 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC15.34■□□□□ 0.05
Rad23bP54728 Gm44158-201ENSMUST00000203881 505 ntBASIC15.34■□□□□ 0.05
Rad23bP54728 Gm2875-201ENSMUST00000211333 360 ntBASIC15.34■□□□□ 0.05
Rad23bP54728 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC15.34■□□□□ 0.05
Rad23bP54728 CT030653.1-201ENSMUST00000224382 1279 ntBASIC15.34■□□□□ 0.05
Rad23bP54728 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rad23bP54728 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rad23bP54728 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rad23bP54728 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rad23bP54728 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rad23bP54728 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Rad23bP54728 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rad23bP54728 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.33■□□□□ 0.05
Rad23bP54728 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rad23bP54728 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.33■□□□□ 0.05
Rad23bP54728 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rad23bP54728 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC15.33■□□□□ 0.04
Rad23bP54728 Gm11989-201ENSMUST00000117240 672 ntBASIC15.33■□□□□ 0.04
Rad23bP54728 Gm12218-201ENSMUST00000117666 399 ntBASIC15.33■□□□□ 0.04
Rad23bP54728 Gm11362-201ENSMUST00000118838 850 ntBASIC15.33■□□□□ 0.04
Rad23bP54728 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.33■□□□□ 0.04
Rad23bP54728 Gm5909-201ENSMUST00000119768 1281 ntBASIC15.33■□□□□ 0.04
Rad23bP54728 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.33■□□□□ 0.04
Rad23bP54728 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms