Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.81□□□□□ -0.84
Rom1P32958 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.81□□□□□ -0.84
Rom1P32958 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.81□□□□□ -0.84
Rom1P32958 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Rom1P32958 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC9.81□□□□□ -0.84
Rom1P32958 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Rom1P32958 Gm2756-201ENSMUST00000195851 400 ntBASIC9.81□□□□□ -0.84
Rom1P32958 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Rom1P32958 AC166051.1-201ENSMUST00000214313 210 ntBASIC9.81□□□□□ -0.84
Rom1P32958 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 CT943659.1-201ENSMUST00000215459 326 ntBASIC9.81□□□□□ -0.84
Rom1P32958 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.81□□□□□ -0.84
Rom1P32958 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.81□□□□□ -0.84
Rom1P32958 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rom1P32958 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC9.8□□□□□ -0.84
Rom1P32958 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rom1P32958 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Rom1P32958 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Rom1P32958 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.8□□□□□ -0.84
Rom1P32958 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.8□□□□□ -0.84
Rom1P32958 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Rom1P32958 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.8□□□□□ -0.84
Rom1P32958 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Rom1P32958 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Gm14704-201ENSMUST00000120300 874 ntBASIC9.8□□□□□ -0.84
Rom1P32958 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Rom1P32958 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.8□□□□□ -0.84
Rom1P32958 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rom1P32958 Gm28760-201ENSMUST00000185995 736 ntBASIC9.8□□□□□ -0.84
Rom1P32958 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rom1P32958 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.8□□□□□ -0.84
Rom1P32958 Gm38294-201ENSMUST00000192831 381 ntBASIC9.8□□□□□ -0.84
Rom1P32958 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Rom1P32958 Gm24136-201ENSMUST00000083374 165 ntBASIC9.8□□□□□ -0.84
Rom1P32958 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.8□□□□□ -0.84
Rom1P32958 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rom1P32958 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rom1P32958 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rom1P32958 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.8□□□□□ -0.84
Rom1P32958 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rom1P32958 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Rom1P32958 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Rom1P32958 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.79□□□□□ -0.84
Rom1P32958 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms