Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Pde6aP27664 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pde6aP27664 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.38□□□□□ -0.11
Pde6aP27664 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Pde6aP27664 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.38□□□□□ -0.11
Pde6aP27664 Gm11930-201ENSMUST00000117788 190 ntBASIC14.38□□□□□ -0.11
Pde6aP27664 Gm14381-201ENSMUST00000122105 414 ntBASIC14.38□□□□□ -0.11
Pde6aP27664 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.38□□□□□ -0.11
Pde6aP27664 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pde6aP27664 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Mir6420-201ENSMUST00000185032 102 ntBASIC14.38□□□□□ -0.11
Pde6aP27664 Gm3096-201ENSMUST00000185770 364 ntBASIC14.38□□□□□ -0.11
Pde6aP27664 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.38□□□□□ -0.11
Pde6aP27664 Gm19994-201ENSMUST00000217086 586 ntBASIC14.38□□□□□ -0.11
Pde6aP27664 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.38□□□□□ -0.11
Pde6aP27664 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.38□□□□□ -0.11
Pde6aP27664 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pde6aP27664 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pde6aP27664 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.38□□□□□ -0.11
Pde6aP27664 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6aP27664 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pde6aP27664 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.37□□□□□ -0.11
Pde6aP27664 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pde6aP27664 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pde6aP27664 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.37□□□□□ -0.11
Pde6aP27664 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.37□□□□□ -0.11
Pde6aP27664 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.37□□□□□ -0.11
Pde6aP27664 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.37□□□□□ -0.11
Pde6aP27664 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.37□□□□□ -0.11
Pde6aP27664 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.37□□□□□ -0.11
Pde6aP27664 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pde6aP27664 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6aP27664 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.37□□□□□ -0.11
Pde6aP27664 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.37□□□□□ -0.11
Pde6aP27664 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Pde6aP27664 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.36□□□□□ -0.11
Pde6aP27664 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Pde6aP27664 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Gm24830-201ENSMUST00000102024 166 ntBASIC14.36□□□□□ -0.11
Pde6aP27664 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pde6aP27664 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.36□□□□□ -0.11
Pde6aP27664 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.36□□□□□ -0.11
Pde6aP27664 Gm20482-202ENSMUST00000174729 825 ntBASIC14.36□□□□□ -0.11
Pde6aP27664 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms