Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Cd8a-202ENSMUST00000172321 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Gm11618-201ENSMUST00000117946 267 ntBASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 B9d1os-201ENSMUST00000137010 674 ntBASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Gm2445-201ENSMUST00000182798 989 ntBASIC10.37□□□□□ -0.75
Tnfrsf9P20334 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC10.37□□□□□ -0.75
Tnfrsf9P20334 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Gm37709-201ENSMUST00000195074 600 ntBASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.37□□□□□ -0.75
Tnfrsf9P20334 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Gm13333-201ENSMUST00000119424 781 ntBASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Gm42516-201ENSMUST00000198691 767 ntBASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf9P20334 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms