Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Gm44855-201ENSMUST00000205725 362 ntBASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Gm18473-201ENSMUST00000220543 868 ntBASIC11.31□□□□□ -0.6
Shisa8J3QNX5 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Gm11618-201ENSMUST00000117946 267 ntBASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.3□□□□□ -0.6
Shisa8J3QNX5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.3□□□□□ -0.6
Shisa8J3QNX5 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa8J3QNX5 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms