Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim55G3X8Y1 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Gm27631-201ENSMUST00000184163 466 ntBASIC12.75□□□□□ -0.37
Trim55G3X8Y1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Gm43474-201ENSMUST00000196415 774 ntBASIC12.75□□□□□ -0.37
Trim55G3X8Y1 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.75□□□□□ -0.37
Trim55G3X8Y1 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim55G3X8Y1 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim55G3X8Y1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms