Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.15□□□□□ -0.63
Shank1D3YZU1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Shank1D3YZU1 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Shank1D3YZU1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
Shank1D3YZU1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Shank1D3YZU1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.15□□□□□ -0.63
Shank1D3YZU1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Shank1D3YZU1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Shank1D3YZU1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Gm14921-201ENSMUST00000118643 908 ntBASIC11.14□□□□□ -0.63
Shank1D3YZU1 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Gm8492-201ENSMUST00000182375 987 ntBASIC11.14□□□□□ -0.63
Shank1D3YZU1 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.14□□□□□ -0.63
Shank1D3YZU1 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Gm807-202ENSMUST00000224929 408 ntBASIC11.14□□□□□ -0.63
Shank1D3YZU1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Gm16397-201ENSMUST00000122201 494 ntBASIC11.14□□□□□ -0.63
Shank1D3YZU1 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.14□□□□□ -0.63
Shank1D3YZU1 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.14□□□□□ -0.63
Shank1D3YZU1 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.14□□□□□ -0.63
Shank1D3YZU1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.14□□□□□ -0.63
Shank1D3YZU1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.13□□□□□ -0.63
Shank1D3YZU1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.13□□□□□ -0.63
Shank1D3YZU1 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.13□□□□□ -0.63
Shank1D3YZU1 Gm28882-201ENSMUST00000185504 314 ntBASIC11.13□□□□□ -0.63
Shank1D3YZU1 Gm29155-201ENSMUST00000185910 269 ntBASIC11.13□□□□□ -0.63
Shank1D3YZU1 Gm28071-201ENSMUST00000190355 478 ntBASIC11.13□□□□□ -0.63
Shank1D3YZU1 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.13□□□□□ -0.63
Shank1D3YZU1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.13□□□□□ -0.63
Shank1D3YZU1 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.13□□□□□ -0.63
Shank1D3YZU1 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.13□□□□□ -0.63
Shank1D3YZU1 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.13□□□□□ -0.63
Shank1D3YZU1 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Gm22138-201ENSMUST00000158748 128 ntBASIC11.13□□□□□ -0.63
Shank1D3YZU1 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Gm10731-201ENSMUST00000181171 448 ntBASIC11.13□□□□□ -0.63
Shank1D3YZU1 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.13□□□□□ -0.63
Shank1D3YZU1 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.13□□□□□ -0.63
Shank1D3YZU1 Ginm1-202ENSMUST00000065124 300 ntBASIC11.13□□□□□ -0.63
Shank1D3YZU1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shank1D3YZU1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms