Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Upk3aQ9JKX8 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk3aQ9JKX8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk3aQ9JKX8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk3aQ9JKX8 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Gm22323-201ENSMUST00000103832 109 ntBASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Gm4034-201ENSMUST00000187674 480 ntBASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Gm44364-201ENSMUST00000198368 141 ntBASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.95□□□□□ -0.5
Upk3aQ9JKX8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm11930-201ENSMUST00000117788 190 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm3096-201ENSMUST00000185770 364 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm8885-201ENSMUST00000189382 598 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm7783-201ENSMUST00000204795 781 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm19994-201ENSMUST00000217086 586 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm9996-201ENSMUST00000070359 913 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms