Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne8Q9DC53 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Gm45784-201ENSMUST00000188360 142 ntBASIC12.94□□□□□ -0.34
Cpne8Q9DC53 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Gm38158-201ENSMUST00000194617 339 ntBASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Gm42937-201ENSMUST00000197360 752 ntBASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne8Q9DC53 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Gm7063-201ENSMUST00000186840 981 ntBASIC12.93□□□□□ -0.34
Cpne8Q9DC53 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms