Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Gm14704-201ENSMUST00000120300 874 ntBASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Gm6152-201ENSMUST00000151704 340 ntBASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Gm16215-201ENSMUST00000161990 637 ntBASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Gm27390-201ENSMUST00000184516 176 ntBASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chaf1bQ9D0N7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.65□□□□□ -0.54
Chaf1bQ9D0N7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms