Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm12616-201ENSMUST00000118594 382 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm7722-201ENSMUST00000120646 741 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm12624-201ENSMUST00000177615 382 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm12621-201ENSMUST00000177760 382 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm12615-201ENSMUST00000177970 382 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm12622-201ENSMUST00000177975 382 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm12627-201ENSMUST00000178412 382 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm12625-201ENSMUST00000179122 382 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm12614-201ENSMUST00000179586 382 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm12613-201ENSMUST00000180323 382 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Mir7677-201ENSMUST00000184226 67 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm18041-201ENSMUST00000218210 618 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Gm21811-201ENSMUST00000096485 930 ntBASIC14.21□□□□□ -0.13
Trex1Q91XB0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trex1Q91XB0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trex1Q91XB0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Trex1Q91XB0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trex1Q91XB0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trex1Q91XB0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trex1Q91XB0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trex1Q91XB0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trex1Q91XB0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Gm25881-201ENSMUST00000157783 103 ntBASIC14.2□□□□□ -0.14
Trex1Q91XB0 Rprl1-201ENSMUST00000158050 327 ntBASIC14.2□□□□□ -0.14
Trex1Q91XB0 Gm9550-201ENSMUST00000161130 862 ntBASIC14.2□□□□□ -0.14
Trex1Q91XB0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.2□□□□□ -0.14
Trex1Q91XB0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.2□□□□□ -0.14
Trex1Q91XB0 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.2□□□□□ -0.14
Trex1Q91XB0 Ntng1-201ENSMUST00000051253 327 ntBASIC14.2□□□□□ -0.14
Trex1Q91XB0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trex1Q91XB0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.2□□□□□ -0.14
Trex1Q91XB0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex1Q91XB0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.19□□□□□ -0.14
Trex1Q91XB0 Gm23596-201ENSMUST00000104304 132 ntBASIC14.19□□□□□ -0.14
Trex1Q91XB0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Gm12165-201ENSMUST00000117047 342 ntBASIC14.19□□□□□ -0.14
Trex1Q91XB0 Gm13408-201ENSMUST00000119822 798 ntBASIC14.19□□□□□ -0.14
Trex1Q91XB0 Gm13935-201ENSMUST00000121859 798 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms