Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Gm37131-201ENSMUST00000192502 1561 ntBASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Gm5419-201ENSMUST00000119301 527 ntBASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Gm1821-202ENSMUST00000227415 750 ntBASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim52Q8CDV4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trim52Q8CDV4 AC160405.1-201ENSMUST00000218207 1545 ntBASIC15.27■□□□□ 0.03
Trim52Q8CDV4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim52Q8CDV4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim52Q8CDV4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trim52Q8CDV4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim52Q8CDV4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim52Q8CDV4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trim52Q8CDV4 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Gm8199-201ENSMUST00000121323 823 ntBASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Gm37835-201ENSMUST00000193305 361 ntBASIC15.26■□□□□ 0.03
Trim52Q8CDV4 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Gm2965-201ENSMUST00000198365 343 ntBASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Gm8038-201ENSMUST00000164674 2044 ntBASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim52Q8CDV4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Gm10051-201ENSMUST00000145209 414 ntBASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Gm7467-201ENSMUST00000185173 652 ntBASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Gm37246-201ENSMUST00000192665 835 ntBASIC15.25■□□□□ 0.03
Trim52Q8CDV4 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Gm10109-202ENSMUST00000206890 1211 ntBASIC15.25■□□□□ 0.03
Trim52Q8CDV4 AC151275.1-201ENSMUST00000224870 585 ntBASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Gm5705-201ENSMUST00000066241 711 ntBASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms