Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Gm12928-201ENSMUST00000117115 573 ntBASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Gm17208-201ENSMUST00000168388 535 ntBASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Gm27437-201ENSMUST00000183429 107 ntBASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Mir6392-201ENSMUST00000184924 108 ntBASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Gm8463-201ENSMUST00000208573 613 ntBASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lysmd4Q8CC84 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Gm7488-201ENSMUST00000117148 684 ntBASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Gm12859-201ENSMUST00000117834 427 ntBASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Proscos-202ENSMUST00000178990 666 ntBASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lysmd4Q8CC84 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms